I did a clean install once again. After first boot i mapped controller, went to Retropie -> configure WiFi -> connected to WiFi and after i went back to menu weren’t working anymore… Then i did a reboot (F4 was working with keyboard) and had to configure controller again at welcome screen.
I followed this guide on youtube: https://www.youtube.com/watch?v=AhkEnDdygbQ
And it didn’t solve my problem but i found out that there is my controllers config saved
So looks like every time i configure controller again it overwrites previous setup. The question is why controller stops working wheni go back to the menu and why i have to configure it at welcome screen every time…