You shouldn’t have to run the retroarch-joyconfig from the retropie menu anymore with the latest beta as that is done automagically when you configure your controller with emulationstation. Its possible there may have been an issue with hat/axis support depending on which controller you’re using and some of those things have been fixed since the beta was released. You can try and see if the fixes work by updating your setup script (and exiting out and going back into the setup script) and then reinstall emulationstation from menu 5. The reboot and reconfigure your controller with emulationstation again and see if that fixes it.
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